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Custom backup routine – space issues

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I have been working on a custom backup routine for a notebook and a netbook; ref. 25851, Custom backup routine. Basically I want to create a simple way to back-up two mobile devices to a USB drive. Here I would like to focus on utilizing space on the notebook and netbook, and the implications this has for a backup/restore strategy. How to organize space on the backup storage device has already been discussed. Included in the discussion are how to assign a meaningful name to a backup file, the value of partitioning the USB drive versus having a more flexible environment, and space requirements for storing multiple Full backups.

Hippodrome
Both the netbook and notebook have one user, and it’s the same person. The operating system is Windows 7 Ultimate edition, 32-BIT. TIH 2010 Netbook edition is used on the netbook; TIH 2011 on the notebook. The netbook’s hard drive capacity is 298.09 GB NTFS format. The notebook has NTFS, 149.05 GB. The target backup device is a Seagate, FreeAgent, USB hard drive, NTFS formatted capacity 465.76 GB.

Space Issues
Should a logical partition be created to separate data from executable programs? If this approach were adopted a Full backup of the System partition could be made while using a different backup mode to backup data. Does this justify the additional complexity?

Data is being categorized by function i.e. My Documents, My Music, My Pictures, My Videos, and My Other. File types are similar within a category and file sizes differ considerably by file type. Therefore a change in mix of activities can affect data storage space requirements, and consequently backup storage space requirements. I am off to see what the data types and file sizes are now, and consider the impact on storage space from changes that are imminent.

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Software I use to move files between the notebook and iPod was inavertently uninstalled. When I tried to downloaded another copy the download could not be completed. I sent an email to the company where I purchased the software and they wrote back telling me they would authorize a new download at no additional cost.

Assuming the problem is caused by corruption within the Windows operating system, what should I do? If I had a Windows installation disk I could run repair, but I do not have the installation disk. I do have image files of the system disk made when the software was installed and running properly. If I restore from them I lose all the changes that happen since the backup was made. Should I have made additional backups using Acronis?